Publications
2019
2.
Muhammad Saif-ur-Rehman; Robin Lienkämper; Yaroslav Parpaley; Jörg Wellmer; Charles Liu; Brian Lee; Spencer Kellis; Richard Andersen; Ioannis Iossifidis; Tobias Glasmachers; Christian Klaes
SpikeDeeptector: a deep-learning based method for detection of neural spiking activity Journal Article
In: Journal of Neural Engineering, vol. 16, no. 5, pp. 056003, 2019.
Abstract | Links | BibTeX | Tags: BCI, CNN, Data Reduction, Machine Learning, Spike Sorting
@article{Saif-ur-Rehman2019,
title = {SpikeDeeptector: a deep-learning based method for detection of neural spiking activity},
author = {Muhammad Saif-ur-Rehman and Robin Lienkämper and Yaroslav Parpaley and Jörg Wellmer and Charles Liu and Brian Lee and Spencer Kellis and Richard Andersen and Ioannis Iossifidis and Tobias Glasmachers and Christian Klaes},
url = {https://iopscience.iop.org/article/10.1088/1741-2552/ab1e63/meta},
doi = {10.1088/1741-2552/ab1e63},
year = {2019},
date = {2019-01-01},
urldate = {2019-01-01},
journal = {Journal of Neural Engineering},
volume = {16},
number = {5},
pages = {056003},
abstract = {Objective . In electrophysiology, microelectrodes are the primary source for recording neural data (single unit activity). These microelectrodes can be implanted individually or in the form of arrays containing dozens to hundreds of channels. Recordings of some channels contain neural activity, which are often contaminated with noise. Another fraction of channels does not record any neural data, but only noise. By noise, we mean physiological activities unrelated to spiking, including technical artifacts and neural activities of neurons that are too far away from the electrode to be usefully processed. For further analysis, an automatic identification and continuous tracking of channels containing neural data is of great significance for many applications, e.g. automated selection of neural channels during online and offline spike sorting. Automated spike detection and sorting is also critical for online decoding in brain–computer interface (BCI) applications, in which on...},
keywords = {BCI, CNN, Data Reduction, Machine Learning, Spike Sorting},
pubstate = {published},
tppubtype = {article}
}
Objective . In electrophysiology, microelectrodes are the primary source for recording neural data (single unit activity). These microelectrodes can be implanted individually or in the form of arrays containing dozens to hundreds of channels. Recordings of some channels contain neural activity, which are often contaminated with noise. Another fraction of channels does not record any neural data, but only noise. By noise, we mean physiological activities unrelated to spiking, including technical artifacts and neural activities of neurons that are too far away from the electrode to be usefully processed. For further analysis, an automatic identification and continuous tracking of channels containing neural data is of great significance for many applications, e.g. automated selection of neural channels during online and offline spike sorting. Automated spike detection and sorting is also critical for online decoding in brain–computer interface (BCI) applications, in which on...
1.
Muhammad Saif-ur-Rehman; Robin Lienkämper; Yaroslav Parpaley; Jörg Wellmer; Charles Liu; Brian Lee; Spencer Kellis; Richard Andersen; Ioannis Iossifidis; Tobias Glasmachers; Christian Klaes
SpikeDeeptector: a deep-learning based method for detection of neural spiking activity Journal Article
In: Journal of Neural Engineering, vol. 16, no. 5, pp. 056003, 2019.
Abstract | Links | BibTeX | Tags: BCI, CNN, Data Reduction, Machine Learning, Spike Sorting
@article{Saif-ur-Rehman2019b,
title = {SpikeDeeptector: a deep-learning based method for detection of neural spiking activity},
author = {Muhammad Saif-ur-Rehman and Robin Lienkämper and Yaroslav Parpaley and Jörg Wellmer and Charles Liu and Brian Lee and Spencer Kellis and Richard Andersen and Ioannis Iossifidis and Tobias Glasmachers and Christian Klaes},
url = {https://iopscience.iop.org/article/10.1088/1741-2552/ab1e63/meta},
doi = {10.1088/1741-2552/ab1e63},
year = {2019},
date = {2019-01-01},
urldate = {2019-01-01},
journal = {Journal of Neural Engineering},
volume = {16},
number = {5},
pages = {056003},
abstract = {Objective . In electrophysiology, microelectrodes are the primary source for recording neural data (single unit activity). These microelectrodes can be implanted individually or in the form of arrays containing dozens to hundreds of channels. Recordings of some channels contain neural activity, which are often contaminated with noise. Another fraction of channels does not record any neural data, but only noise. By noise, we mean physiological activities unrelated to spiking, including technical artifacts and neural activities of neurons that are too far away from the electrode to be usefully processed. For further analysis, an automatic identification and continuous tracking of channels containing neural data is of great significance for many applications, e.g. automated selection of neural channels during online and offline spike sorting. Automated spike detection and sorting is also critical for online decoding in brain–computer interface (BCI) applications, in which on...},
keywords = {BCI, CNN, Data Reduction, Machine Learning, Spike Sorting},
pubstate = {published},
tppubtype = {article}
}
Objective . In electrophysiology, microelectrodes are the primary source for recording neural data (single unit activity). These microelectrodes can be implanted individually or in the form of arrays containing dozens to hundreds of channels. Recordings of some channels contain neural activity, which are often contaminated with noise. Another fraction of channels does not record any neural data, but only noise. By noise, we mean physiological activities unrelated to spiking, including technical artifacts and neural activities of neurons that are too far away from the electrode to be usefully processed. For further analysis, an automatic identification and continuous tracking of channels containing neural data is of great significance for many applications, e.g. automated selection of neural channels during online and offline spike sorting. Automated spike detection and sorting is also critical for online decoding in brain–computer interface (BCI) applications, in which on...